PPGR - Gene Detail

Gene ID	Ciclev10022723m.g.v1.0 View in Genome Browser
Position	scaffold_3:37094785-37098257 (-) 3472bp
Gene Type	gene
Gene Description (Protein Product)	DNA-directed RNA polymerases
Organism	Citrus clementina
Also AS	AT1G54250CICLE_v10022723mg

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Ciclev10033492m.g.v1.0 DNA-directed RNA polymerases I; II; and III subunit Ciclev10028849m.g.v1.0 DNA-directed RNA polymerases II; IV and V subunit Ciclev10033103m.g.v1.0 DNA-directed RNA polymerases II; IV and V subunit
Regulatory gene	Ciclev10000225m.g.v1.0 B3 domain-containing Ciclev10000881m.g.v1.0 B3 domain-containing protein Ciclev10001063m.g.v1.0 B3 domain-containing protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0000418	RNA polymerase IV complex	CC
GO:0000419	RNA polymerase V complex	CC
GO:0000428	DNA-directed RNA polymerase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005654	nucleoplasm	CC
GO:0005665	RNA polymerase II, core complex	CC
GO:0005666	RNA polymerase III complex	CC
GO:0005730	nucleolus	CC
GO:0005736	RNA polymerase I complex	CC
GO:0016591	RNA polymerase II, holoenzyme	CC
GO:0030880	RNA polymerase complex	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044451	obsolete nucleoplasm part	CC
GO:0044452	obsolete nucleolar part	CC
GO:0044464	obsolete cell part	CC
GO:0055029	nuclear DNA-directed RNA polymerase complex	CC
GO:0061695	transferase complex, transferring phosphorus-containing groups	CC
GO:0070013	intracellular organelle lumen	CC
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC

KEGG Term	Name	Description
map03020	RNA polymerase	-