Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Ciclev10023712m.g.v1.0
View in Genome Browser
Position
scaffold_3:46025851-46027669 (+)
1818bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 28 family
Organism
Citrus clementina
Also AS AT1G02790CICLE_v10023712mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10033386m.g.v1.0 Polygalacturonase
Ciclev10027366m.g.v1.0 Belongs to the glycosyl hydrolase 28 family
Ciclev10026919m.g.v1.0 Belongs to the glycosyl hydrolase 28 family
Regulatory gene
Ciclev10001400m.g.v1.0 Protein BASIC PENTACYSTEINE6-like
Ciclev10001730m.g.v1.0 transcription factor
Ciclev10002410m.g.v1.0 Floral homeotic protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004650 polygalacturonase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0030312 external encapsulating structure CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -