PPGR - Gene Detail

Gene ID	Ciclev10024383m.g.v1.0 View in Genome Browser
Position	scaffold_3:22640809-22641240 (+) 431bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the universal ribosomal protein uL16 family
Organism	Citrus clementina
Also AS	ATCG00790CICLE_v10024383mg

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Ciclev10024425m.g.v1.0 structural constituent of ribosome Ciclev10026113m.g.v1.0 Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits Ciclev10026299m.g.v1.0 Belongs to the universal ribosomal protein uS3 family
Regulatory gene	Ciclev10000671m.g.v1.0 Belongs to the GRAS family Ciclev10000940m.g.v1.0 Belongs to the GRAS family Ciclev10001292m.g.v1.0 transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005840	ribosome	CC
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009941	chloroplast envelope	CC
GO:0015934	large ribosomal subunit	CC
GO:0019843	rRNA binding	MF
GO:0022625	cytosolic large ribosomal subunit	CC
GO:0022626	cytosolic ribosome	CC
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044391	ribosomal subunit	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044445	obsolete cytosolic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0097159	organic cyclic compound binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1990904	ribonucleoprotein complex	CC

KEGG Term	Name	Description
map03010	Ribosome	-