PPGR - Gene Detail

Basic Information

Gene ID	Ciclev10026605m.g.v1.0 View in Genome Browser
Position	scaffold_7:7050965-7054328 (+) 3363bp
Gene Type	gene
Gene Description (Protein Product)	Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation
Organism	Citrus clementina
Also AS	AT3G13970CICLE_v10026605mg

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ciclev10030717m.g.v1.0 Belongs to the PI3 PI4-kinase family

Ciclev10027396m.g.v1.0 serine threonine-protein kinase

Ciclev10027506m.g.v1.0 serine threonine-protein kinase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000045	autophagosome assembly	BP
GO:0000407	phagophore assembly site	CC
GO:0000422	autophagy of mitochondrion	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006497	protein lipidation	BP
GO:0006501	C-terminal protein lipidation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006914	autophagy	BP
GO:0006996	organelle organization	BP
GO:0007005	mitochondrion organization	BP
GO:0007033	vacuole organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016236	macroautophagy	BP
GO:0016740	transferase activity	MF
GO:0018410	C-terminal protein amino acid modification	BP
GO:0019538	protein metabolic process	BP
GO:0019776	Atg8 ligase activity	MF
GO:0022411	cellular component disassembly	BP
GO:0022607	cellular component assembly	BP
GO:0032991	protein-containing complex	CC
GO:0034045	phagophore assembly site membrane	CC
GO:0034274	Atg12-Atg5-Atg16 complex	CC
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0036211	protein modification process	BP
GO:0042157	lipoprotein metabolic process	BP
GO:0042158	lipoprotein biosynthetic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0043687	post-translational protein modification	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0044804	autophagy of nucleus	BP
GO:0061726	mitochondrion disassembly	BP
GO:0061919	process utilizing autophagic mechanism	BP
GO:0070925	organelle assembly	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0098805	membrane	CC
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1902494	catalytic complex	CC
GO:1903008	organelle disassembly	BP
GO:1905037	autophagosome organization	BP
GO:1990234	transferase complex	CC