Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Ciclev10027185m.g.v1.0
View in Genome Browser
Position
scaffold_7:10990920-10992125 (+)
1205bp
Gene Type
gene
Gene Description (Protein Product)
ATP binding
Organism
Citrus clementina
Also AS AT4G16660CICLE_v10027185mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10028154m.g.v1.0 Calnexin homolog
Ciclev10031185m.g.v1.0 Calnexin homolog
Ciclev10033842m.g.v1.0 intramolecular oxidoreductase activity; transposing S-S bonds

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000166 nucleotide binding MF
GO:0000774 adenyl-nucleotide exchange factor activity MF
GO:0001666 response to hypoxia BP
GO:0002931 response to ischemia BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005783 endoplasmic reticulum CC
GO:0005788 endoplasmic reticulum lumen CC
GO:0005790 smooth endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0006457 protein folding BP
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0006950 response to stress BP
GO:0006986 response to unfolded protein BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008104 protein localization BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009628 response to abiotic stimulus BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0010941 regulation of cell death BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0017076 purine nucleotide binding MF
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023057 negative regulation of signaling BP
GO:0030139 endocytic vesicle CC
GO:0030234 enzyme regulator activity MF
GO:0030554 adenyl nucleotide binding MF
GO:0030968 endoplasmic reticulum unfolded protein response BP
GO:0031090 organelle membrane CC
GO:0031204 post-translational protein targeting to membrane, translocation BP
GO:0031410 cytoplasmic vesicle CC
GO:0031974 membrane-enclosed lumen CC
GO:0031982 vesicle CC
GO:0031983 vesicle lumen CC
GO:0032501 multicellular organismal process BP
GO:0032504 multicellular organism reproduction BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0033554 cellular response to stress BP
GO:0034613 protein localization BP
GO:0034620 cellular response to unfolded protein BP
GO:0034663 endoplasmic reticulum chaperone complex CC
GO:0034975 protein folding in endoplasmic reticulum BP
GO:0034976 response to endoplasmic reticulum stress BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0035966 response to topologically incorrect protein BP
GO:0035967 cellular response to topologically incorrect protein BP
GO:0036094 small molecule binding MF
GO:0036293 response to decreased oxygen levels BP
GO:0036294 cellular response to decreased oxygen levels BP
GO:0036498 IRE1-mediated unfolded protein response BP
GO:0042221 response to chemical BP
GO:0042886 amide transport BP
GO:0042981 regulation of apoptotic process BP
GO:0043066 negative regulation of apoptotic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043523 regulation of neuron apoptotic process BP
GO:0043524 negative regulation of neuron apoptotic process BP
GO:0044421 obsolete extracellular region part CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045047 protein targeting to ER BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051082 unfolded protein binding MF
GO:0051087 chaperone binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0060205 cytoplasmic vesicle lumen CC
GO:0060548 negative regulation of cell death BP
GO:0060589 nucleoside-triphosphatase regulator activity MF
GO:0060590 ATPase regulator activity MF
GO:0061077 chaperone-mediated protein folding BP
GO:0065002 intracellular protein transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070482 response to oxygen levels BP
GO:0070727 cellular macromolecule localization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0070972 protein localization to endoplasmic reticulum BP
GO:0071310 cellular response to organic substance BP
GO:0071453 cellular response to oxygen levels BP
GO:0071456 cellular response to hypoxia BP
GO:0071682 endocytic vesicle lumen CC
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071806 protein transmembrane transport BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072599 establishment of protein localization to endoplasmic reticulum BP
GO:0072657 protein localization to membrane BP
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP
GO:0090150 establishment of protein localization to membrane BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098657 import into cell BP
GO:0098772 molecular function regulator activity MF
GO:0098805 membrane CC
GO:1900037 regulation of cellular response to hypoxia BP
GO:1900038 negative regulation of cellular response to hypoxia BP
GO:1901214 regulation of neuron death BP
GO:1901215 negative regulation of neuron death BP
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902235 regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway BP
GO:1902236 negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1902532 negative regulation of intracellular signal transduction BP
GO:1903297 regulation of hypoxia-induced intrinsic apoptotic signaling pathway BP
GO:1903298 negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway BP
GO:1903381 regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway BP
GO:1903382 negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway BP
GO:1903573 negative regulation of response to endoplasmic reticulum stress BP
GO:1905897 regulation of response to endoplasmic reticulum stress BP
GO:2001233 regulation of apoptotic signaling pathway BP
GO:2001234 negative regulation of apoptotic signaling pathway BP
GO:2001242 regulation of intrinsic apoptotic signaling pathway BP
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway BP
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.