Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
Ciclev10029374m.g.v1.0
View in Genome Browser
Position
scaffold_8:24658686-24660267 (-)
1581bp
Gene Type
gene
Gene Description (Protein Product)
SAGA-associated factor 11
Organism
Citrus clementina
Also AS AT5G58575CICLE_v10029374mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10033394m.g.v1.0 Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex; participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators; where it is required for transcription. The TREX-2 complex functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery
Ciclev10032895m.g.v1.0 Transcription initiation factor TFIID subunit
Ciclev10029437m.g.v1.0 Belongs to the small heat shock protein (HSP20) family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail