Basic Information
Gene ID
Ciclev10029623m.g.v1.0
Position
scaffold_8:24532868-24534207 (-)
1339bp
Gene Type
gene
Gene Description (Protein Product)
PHD finger-like domain-containing protein
Organism
Also AS AT1G07170CICLE_v10029623mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10033685m.g.v1.0 Crooked neck-like protein 1
Ciclev10033061m.g.v1.0 U6 snRNA-associated Sm-like protein
Ciclev10030694m.g.v1.0 U4 U6 small nuclear ribonucleoprotein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.