Basic Information
Gene ID
Ciclev10030496m.g.v1.0
Position
scaffold_4:24662244-24670352 (-)
8108bp
Gene Type
gene
Gene Description (Protein Product)
Intron-binding protein
Organism
Also AS AT2G38770CICLE_v10030496mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10032914m.g.v1.0 Peptidyl-prolyl cis-trans isomerase
Ciclev10033668m.g.v1.0 generation of catalytic spliceosome for first transesterification step
Ciclev10030532m.g.v1.0 Splicing factor 3B subunit
Regulatory gene
Ciclev10000756m.g.v1.0 Transcription factor
Ciclev10000850m.g.v1.0 Protein SENSITIVE TO PROTON RHIZOTOXICITY
Ciclev10000982m.g.v1.0 zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.