PPGR - Gene Detail

Basic Information

Gene ID	Ciclev10031168m.g.v1.0 View in Genome Browser
Position	scaffold_4:20982676-20988522 (-) 5846bp
Gene Type	gene
Gene Description (Protein Product)	Sphingosine-1-phosphate lyase
Organism	Citrus clementina
Also AS	AT1G27980CICLE_v10031168mg

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ciclev10033567m.g.v1.0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However; all known phosphorylases share catalytic and structural properties

Ciclev10032432m.g.v1.0 Belongs to the sterol desaturase family

Ciclev10033335m.g.v1.0 Belongs to the sterol desaturase family

Regulatory gene

Ciclev10001376m.g.v1.0 tesmin TSO1-like CXC

Ciclev10002179m.g.v1.0 dof zinc finger protein

Ciclev10002237m.g.v1.0 dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0006629	lipid metabolic process	BP
GO:0006643	membrane lipid metabolic process	BP
GO:0006665	sphingolipid metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016042	lipid catabolic process	BP
GO:0030149	sphingolipid catabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046466	membrane lipid catabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00600	Sphingolipid metabolism	-