Basic Information
Gene ID
Ciclev10031363m.g.v1.0
Position
scaffold_4:22812346-22815857 (-)
3511bp
Gene Type
gene
Gene Description (Protein Product)
U4 U6 small nuclear ribonucleoprotein
Organism
Also AS AT1G60170CICLE_v10031363mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10033145m.g.v1.0 Thioredoxin-like protein
Ciclev10033145m.g.v1.0 Mitosis protein DIM1
Ciclev10033061m.g.v1.0 U6 snRNA-associated Sm-like protein
Regulatory gene
Ciclev10001730m.g.v1.0 transcription factor
Ciclev10002179m.g.v1.0 dof zinc finger protein
Ciclev10002237m.g.v1.0 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.