Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g000058m.g.v1.1
View in Genome Browser
Position
scaffold00001:5897295-5916737 (-)
19442bp
Gene Type
gene
Gene Description (Protein Product)
piezo-type mechanosensitive ion channel homolog
Organism
Citrus sinensis
Also AS AT2G48060CICLE_v10018445mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g020632m.g.v1.1 isoform X1
orange1.1g032280m.g.v1.1 isoform X1
orange1.1g048601m.g.v1.1 ankyrin repeat
Regulatory gene
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g003750m.g.v1.1 PHD zinc finger
orange1.1g003766m.g.v1.1 Trihelix transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005216 monoatomic ion channel activity MF
GO:0005261 monoatomic cation channel activity MF
GO:0005575 cellular_component CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008381 mechanosensitive monoatomic ion channel activity MF
GO:0009581 detection of external stimulus BP
GO:0009582 detection of abiotic stimulus BP
GO:0009605 response to external stimulus BP
GO:0009612 response to mechanical stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015267 channel activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0016020 membrane CC
GO:0022803 passive transmembrane transporter activity MF
GO:0022836 gated channel activity MF
GO:0022838 channel activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042391 regulation of membrane potential BP
GO:0050896 response to stimulus BP
GO:0050982 detection of mechanical stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051606 detection of stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071260 cellular response to mechanical stimulus BP
GO:0071496 cellular response to external stimulus BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0104004 cellular response to environmental stimulus BP