PPGR - Gene Detail

Basic Information

Gene ID	orange1.1g000615m.g.v1.1 View in Genome Browser
Position	scaffold00056:375790-382948 (-) 7158bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily
Organism	Citrus sinensis
Also AS	AT2G36380CICLE_v10010901mg

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

orange1.1g024800m.g.v1.1 Belongs to the 14-3-3 family

orange1.1g025497m.g.v1.1 Belongs to the 14-3-3 family

orange1.1g038333m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

orange1.1g003766m.g.v1.1 Trihelix transcription factor

orange1.1g004963m.g.v1.1 WRKY Transcription Factor

orange1.1g005465m.g.v1.1 Transcriptional activator that binds specific DNA sequence

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000302	response to reactive oxygen species	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005215	transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006810	transport	BP
GO:0006855	xenobiotic transmembrane transport	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0015399	primary active transmembrane transporter activity	MF
GO:0015405	ATPase-coupled transmembrane transporter activity	MF
GO:0015893	xenobiotic transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016462	pyrophosphatase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016817	hydrolase activity, acting on acid anhydrides	MF
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	MF
GO:0016887	ATP hydrolysis activity	MF
GO:0017111	ribonucleoside triphosphate phosphatase activity	MF
GO:0022804	active transmembrane transporter activity	MF
GO:0022857	transmembrane transporter activity	MF
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042623	ATP hydrolysis activity	MF
GO:0042626	ATPase-coupled transmembrane transporter activity	MF
GO:0043492	ATPase-coupled transmembrane transporter activity	MF
GO:0044425	obsolete membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0055085	transmembrane transport	BP
GO:0071944	cell periphery	CC
GO:1901700	response to oxygen-containing compound	BP