Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g005869m.g.v1.1
View in Genome Browser
Position
scaffold00007:1165407-1170644 (-)
5237bp
Gene Type
gene
Gene Description (Protein Product)
exonuclease
Organism
Citrus sinensis
Also AS AT1G29630CICLE_v10014561mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g041466m.g.v1.1 DNA mismatch repair protein
orange1.1g034043m.g.v1.1 Small ubiquitin-related modifier
orange1.1g024527m.g.v1.1 This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
Regulatory gene
orange1.1g011016m.g.v1.1 Cyclic dof factor
orange1.1g011169m.g.v1.1 Cyclic dof factor
orange1.1g011752m.g.v1.1 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03430 Mismatch repair DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.