Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g013696m.g.v1.1
View in Genome Browser
Position
scaffold00004:3775144-3779484 (+)
4340bp
Gene Type
gene
Gene Description (Protein Product)
Tetratricopeptide repeats
Organism
Citrus sinensis
Also AS AT1G56440CICLE_v10003914mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g047695m.g.v1.1 ARM repeat superfamily protein
orange1.1g046825m.g.v1.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
orange1.1g014354m.g.v1.1 GPN-loop GTPase 1 homolog
Regulatory gene
orange1.1g000304m.g.v1.1 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
orange1.1g001409m.g.v1.1 Myb-like protein L
orange1.1g004488m.g.v1.1 Belongs to the GRAS family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097255 R2TP complex CC