Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g020131m.g.v1.1
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Position
scaffold00035:606293-611194 (-)
4901bp
Gene Type
gene
Gene Description (Protein Product)
General transcription factor IIE subunit
Organism
Citrus sinensis
Also AS AT1G03280AT4G20810CICLE_v10019993mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g023374m.g.v1.1 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase
orange1.1g035190m.g.v1.1 General transcription factor IIH subunit
orange1.1g032288m.g.v1.1 DNA-directed RNA polymerases
Regulatory gene
orange1.1g011016m.g.v1.1 Cyclic dof factor
orange1.1g011169m.g.v1.1 Cyclic dof factor
orange1.1g011752m.g.v1.1 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03022 Basal transcription factors -