Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g021941m.g.v1.1
View in Genome Browser
Position
scaffold00002:3027247-3028164 (+)
917bp
Gene Type
gene
Gene Description (Protein Product)
Zinc-finger homeodomain protein
Organism
Citrus sinensis
Also AS AT1G75240CICLE_v10001952mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g046396m.g.v1.1 Zinc-finger homeodomain protein
orange1.1g043261m.g.v1.1 Zinc-finger homeodomain protein
orange1.1g026161m.g.v1.1 Zinc-finger homeodomain protein
Regulatory gene
orange1.1g018368m.g.v1.1 Protein BASIC PENTACYSTEINE6-like
orange1.1g021524m.g.v1.1 Protein BASIC PENTACYSTEINE4-like
orange1.1g022806m.g.v1.1 Protein BASIC PENTACYSTEINE2-like
Target gene
orange1.1g000001m.g.v1.1 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
orange1.1g000012m.g.v1.1 E3 ubiquitin-protein ligase
orange1.1g000017m.g.v1.1 Chromatin structure-remodeling complex protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF