Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g025665m.g.v1.1
View in Genome Browser
Position
scaffold00050:369894-374155 (-)
4261bp
Gene Type
gene
Gene Description (Protein Product)
Transcription factor
Organism
Citrus sinensis
Also AS AT5G57150CICLE_v100092852mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g030957m.g.v1.1 transcription factor
orange1.1g037441m.g.v1.1 Transcription factor
orange1.1g030977m.g.v1.1 Component of the Mediator complex; a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery
Regulatory gene
orange1.1g002489m.g.v1.1 B3 domain-containing protein
orange1.1g002708m.g.v1.1 B3 domain-containing
orange1.1g010160m.g.v1.1 B3 domain-containing protein Os01g0234100-like
Target gene
orange1.1g000017m.g.v1.1 Chromatin structure-remodeling complex protein
orange1.1g000202m.g.v1.1 Belongs to the disease resistance NB-LRR family
orange1.1g000262m.g.v1.1 histone acetyl-transferase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP