Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g027784m.g.v1.1
View in Genome Browser
Position
scaffold00001:1247324-1250625 (+)
3301bp
Gene Type
gene
Gene Description (Protein Product)
protein cornichon homolog
vesicle-mediated transport
Organism
Citrus sinensis
Also AS AT1G12390AT1G12340CICLE_v10022158mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g031896m.g.v1.1 Nuclear pore complex protein NUP35
orange1.1g046019m.g.v1.1 -
orange1.1g028967m.g.v1.1 Sterile alpha motif (SAM) domain-containing protein
Regulatory gene
orange1.1g000304m.g.v1.1 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
orange1.1g001409m.g.v1.1 Myb-like protein L
orange1.1g002869m.g.v1.1 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001664 G protein-coupled receptor binding MF
GO:0003674 molecular_function MF
GO:0005102 signaling receptor binding MF
GO:0005126 cytokine receptor binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005793 endoplasmic reticulum-Golgi intermediate compartment CC
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0031730 CCR5 chemokine receptor binding MF
GO:0042379 chemokine receptor binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048020 CCR chemokine receptor binding MF
GO:0048193 Golgi vesicle transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP