Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g032296m.g.v1.1
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Position
scaffold00106:164086-165244 (+)
1158bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes small subunit family
Organism
Citrus sinensis
Also AS AT2G19790CICLE_v10009831mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g045023m.g.v1.1 AP-1 complex subunit
orange1.1g040316m.g.v1.1 Part of the AP-3 complex; an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles
orange1.1g048218m.g.v1.1 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles; which further mediate biosynthetic protein transport from the ER; via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes; and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
Regulatory gene
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g002213m.g.v1.1 Tesmin/TSO1-like CXC domain
orange1.1g003750m.g.v1.1 PHD zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0030117 membrane coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030124 AP-4 adaptor complex CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048475 coated membrane CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098796 membrane protein complex CC