Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g035327m.g.v1.1
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Position
scaffold00022:392055-392812 (+)
757bp
Gene Type
gene
Gene Description (Protein Product)
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Organism
Citrus sinensis
Also AS AT4G14560CICLE_v10022370mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g043927m.g.v1.1 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
orange1.1g048172m.g.v1.1 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
orange1.1g039404m.g.v1.1 Topless-related protein
Regulatory gene
orange1.1g000392m.g.v1.1 lysine-specific demethylase
orange1.1g007551m.g.v1.1 dnaJ homolog subfamily C member
orange1.1g007898m.g.v1.1 ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0010033 response to organic substance BP
GO:0042221 response to chemical BP
GO:0050896 response to stimulus BP
KEGG Term Name Description
map04075 Plant hormone signal transduction -