Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g035661m.g.v1.1
View in Genome Browser
Position
scaffold00245:129307-130096 (+)
789bp
Gene Type
gene
Gene Description (Protein Product)
homeobox-leucine zipper protein
Organism
Citrus sinensis
Also AS AT5G53980CICLE_v10009522mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g044606m.g.v1.1 Zinc finger protein
orange1.1g042913m.g.v1.1 serine threonine-protein kinase
orange1.1g036474m.g.v1.1 May act as a component of the auxin efflux carrier
Target gene
orange1.1g000001m.g.v1.1 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
orange1.1g000007m.g.v1.1 negative regulation of inclusion body assembly
orange1.1g000014m.g.v1.1 E3 ubiquitin-protein ligase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009642 response to light intensity BP
GO:0009646 response to absence of light BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0043565 sequence-specific DNA binding MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP