Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g043376m.g.v1.1
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Position
scaffold00009:716656-717702 (+)
1046bp
Gene Type
gene
Gene Description (Protein Product)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2;6-diaminopimelate ligase
Organism
Citrus sinensis
Also AS AT1G63680CICLE_v10018956mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g047789m.g.v1.1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
orange1.1g045654m.g.v1.1 UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2;6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity
orange1.1g044054m.g.v1.1 formate-tetrahydrofolate
Regulatory gene
orange1.1g000392m.g.v1.1 lysine-specific demethylase
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g002869m.g.v1.1 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009295 nucleoid CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009987 cellular process BP
GO:0010020 chloroplast fission BP
GO:0010468 regulation of gene expression BP
GO:0016043 cellular component organization BP
GO:0019222 regulation of metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043572 plastid fission BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048285 organelle fission BP
GO:0050789 regulation of biological process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071840 cellular component organization or biogenesis BP