Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g043648m.g.v1.1
View in Genome Browser
Position
scaffold00028:1025757-1028724 (-)
2967bp
Gene Type
gene
Gene Description (Protein Product)
Protein FAR1-RELATED SEQUENCE
Organism
Citrus sinensis
Also AS AT2G27110CICLE_v10018084mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g048350m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
orange1.1g046387m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
orange1.1g047530m.g.v1.1 lob domain-containing protein
Regulatory gene
orange1.1g002213m.g.v1.1 Tesmin/TSO1-like CXC domain
orange1.1g002869m.g.v1.1 homeobox-leucine zipper protein
orange1.1g003069m.g.v1.1 homeobox-leucine zipper protein
Target gene
orange1.1g000068m.g.v1.1 transposition; RNA-mediated
orange1.1g000112m.g.v1.1 Belongs to the peptidase C2 family
orange1.1g000370m.g.v1.1 TPL-binding domain in jasmonate signalling

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0030054 cell junction CC
GO:0055044 symplast CC