Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g043757m.g.v1.1
View in Genome Browser
Position
scaffold00001:4870360-4872189 (-)
1829bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 28 family
Organism
Citrus sinensis
Also AS AT1G02790CICLE_v10023712mg

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g046411m.g.v1.1 Polygalacturonase-like
orange1.1g047411m.g.v1.1 Belongs to the glycosyl hydrolase 28 family
orange1.1g047296m.g.v1.1 Polygalacturonase-like
Regulatory gene
orange1.1g000392m.g.v1.1 lysine-specific demethylase
orange1.1g007551m.g.v1.1 dnaJ homolog subfamily C member
orange1.1g007898m.g.v1.1 ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004650 polygalacturonase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0030312 external encapsulating structure CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -