Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g043830m.g.v1.1
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Position
scaffold00056:91202-94014 (-)
2812bp
Gene Type
gene
Gene Description (Protein Product)
3-deoxy-D-manno-octulosonic acid transferase
Organism
Citrus sinensis
Also AS AT5G03770CICLE_v10013092mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g047789m.g.v1.1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
orange1.1g046522m.g.v1.1 May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter; which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex
orange1.1g045823m.g.v1.1 DNA excision repair protein
Regulatory gene
orange1.1g000392m.g.v1.1 lysine-specific demethylase
orange1.1g007551m.g.v1.1 dnaJ homolog subfamily C member
orange1.1g007898m.g.v1.1 ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -