PPGR - Gene Detail

Basic Information

Gene ID	orange1.1g044104m.g.v1.1 View in Genome Browser
Position	scaffold00008:1646541-1647532 (-) 991bp
Gene Type	gene
Gene Description (Protein Product)	The H protein shuttles the methylamine group of glycine from the P protein to the T protein
Organism	Citrus sinensis
Also AS	AT2G35120CICLE_v10017047mg

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

orange1.1g045599m.g.v1.1 Dehydrogenase

orange1.1g048350m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

orange1.1g046387m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY

orange1.1g002869m.g.v1.1 homeobox-leucine zipper protein

orange1.1g003069m.g.v1.1 homeobox-leucine zipper protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].