Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
orange1.1g044188m.g.v1.1
View in Genome Browser
Position
scaffold00001:1978389-1982006 (-)
3617bp
Gene Type
gene
Gene Description (Protein Product)
Domain of unknown function (DUF4378)
Organism
Citrus sinensis
Also AS AT4G00440CICLE_v10018716mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g048057m.g.v1.1 Ubiquitin-like superfamily protein
orange1.1g046005m.g.v1.1 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine
orange1.1g046527m.g.v1.1 Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW); a modified base adjacent to the anticodon of tRNAs and required for accurate decoding
Regulatory gene
orange1.1g018368m.g.v1.1 Protein BASIC PENTACYSTEINE6-like
orange1.1g021524m.g.v1.1 Protein BASIC PENTACYSTEINE4-like
orange1.1g022806m.g.v1.1 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)