PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Gene ID	orange1.1g044308m.g.v1.1 View in Genome Browser
Position	scaffold00334:23341-25278 (-) 1937bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the adaptor complexes medium subunit family
Organism	Citrus sinensis
Also AS	AT5G57460CICLE_v10007551mg

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)

orange1.1g045826m.g.v1.1 External alternative NAD(P)H-ubiquinone oxidoreductase

orange1.1g048707m.g.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

orange1.1g044458m.g.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

KEGG Term	Name	Description
map03440	Homologous recombination	Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.