Basic Information
Gene ID
orange1.1g044889m.g.v1.1
Position
scaffold00011:2280180-2283912 (+)
3732bp
Gene Type
gene
Gene Description (Protein Product)
Tudor PWWP MBT superfamily protein
Organism
Also AS AT5G27650CICLE_v10006926mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g046900m.g.v1.1 1-aminocyclopropane-1-carboxylate synthase
orange1.1g046469m.g.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
orange1.1g046713m.g.v1.1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Regulatory gene
orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY
orange1.1g002489m.g.v1.1 B3 domain-containing protein
orange1.1g002708m.g.v1.1 B3 domain-containing

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].