Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g045399m.g.v1.1
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Position
scaffold00048:9102-14260 (-)
5158bp
Gene Type
gene
Gene Description (Protein Product)
eukaryotic translation initiation factor isoform
Organism
Citrus sinensis
Also AS AT5G57870CICLE_v10007494mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g046825m.g.v1.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
orange1.1g045896m.g.v1.1 Polyadenylate-binding protein-interacting protein
orange1.1g047170m.g.v1.1 translation initiation factor activity
Regulatory gene
orange1.1g002489m.g.v1.1 B3 domain-containing protein
orange1.1g002708m.g.v1.1 B3 domain-containing
orange1.1g010160m.g.v1.1 B3 domain-containing protein Os01g0234100-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF