PPGR - Gene Detail

Basic Information

Gene ID	orange1.1g046235m.g.v1.1 View in Genome Browser
Position	scaffold00085:195838-198160 (-) 2322bp
Gene Type	gene
Gene Description (Protein Product)	inositol oxygenase
Organism	Citrus sinensis
Also AS	AT1G14520CICLE_v10005543mg

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

orange1.1g048350m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

orange1.1g046387m.g.v1.1 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

orange1.1g046339m.g.v1.1 Belongs to the UDP-glycosyltransferase family

Regulatory gene

orange1.1g000304m.g.v1.1 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains

orange1.1g001099m.g.v1.1 Protein ALWAYS EARLY

orange1.1g001409m.g.v1.1 Myb-like protein L

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	MF
GO:0050113	inositol oxygenase activity	MF
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00562	Inositol phosphate metabolism	-
map00053	Ascorbate and aldarate metabolism	-