Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g047604m.g.v1.1
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Position
scaffold00011:792317-796611 (+)
4294bp
Gene Type
gene
Gene Description (Protein Product)
Vacuole membrane protein
Organism
Citrus sinensis
Also AS AT4G14950CICLE_v10006686mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
orange1.1g048629m.g.v1.1 Leucine-rich repeat extensin-like protein 3
orange1.1g047721m.g.v1.1 atatg2;atg2
orange1.1g047971m.g.v1.1 Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily
Regulatory gene
orange1.1g018368m.g.v1.1 Protein BASIC PENTACYSTEINE6-like
orange1.1g021524m.g.v1.1 Protein BASIC PENTACYSTEINE4-like
orange1.1g022806m.g.v1.1 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000407 phagophore assembly site CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006996 organelle organization BP
GO:0007029 endoplasmic reticulum organization BP
GO:0007030 Golgi organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0010256 endomembrane system organization BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0031984 organelle subcompartment CC
GO:0032940 secretion by cell BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046903 secretion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098827 endoplasmic reticulum subcompartment CC