Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
orange1.1g048767m.g.v1.1
View in Genome Browser
Position
scaffold00071:169743-174619 (-)
4876bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear matrix constituent protein 1-like
Organism
Citrus sinensis
Also AS AT1G67230CICLE_v10013467mg

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
orange1.1g000392m.g.v1.1 lysine-specific demethylase
orange1.1g007551m.g.v1.1 dnaJ homolog subfamily C member
orange1.1g007898m.g.v1.1 ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000229 obsolete cytoplasmic chromosome CC
GO:0000785 chromatin CC
GO:0000789 chromatin CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005635 nuclear envelope CC
GO:0005652 nuclear lamina CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016043 cellular component organization BP
GO:0031967 organelle envelope CC
GO:0031974 membrane-enclosed lumen CC
GO:0031975 envelope CC
GO:0031981 nuclear lumen CC
GO:0032535 regulation of cellular component size BP
GO:0034399 nuclear periphery CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0071840 cellular component organization or biogenesis BP
GO:0090066 regulation of anatomical structure size BP
GO:0097298 regulation of nucleus size BP