Basic Information
Gene ID
evm.TU.Chr15.1127
Position
Chr15:28164232-28174786 (-)
10554bp
Gene Type
gene
Gene Description (Protein Product)
Small nuclear ribonucleoprotein
Organism
Also AS AT4G30330

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.Chr8.1106 mitotic sister chromatid biorientation
evm.TU.Chr8.1106 snRNP Sm proteins
Regulatory gene
evm.TU.Chr1.1746 Denticleless protein homolog
evm.TU.Chr1.2528 Zinc finger protein
evm.TU.Chr1.2776_evm.TU.Chr1.2777 BEL1-like homeodomain protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.