Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
evm.TU.Chr3.1907
View in Genome Browser
Position
Chr3:41434962-41456643 (+)
21681bp
Gene Type
gene
Gene Description (Protein Product)
gag-polypeptide of LTR copia-type
Organism
Diospyros oleifera Cheng
Also AS AT4G00980

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.Chr6.1649 DNA RNA-binding protein
evm.TU.Chr8.1800 3-ketoacyl-CoA synthase
evm.TU.Chr8.1800 Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity
Regulatory gene
evm.TU.Chr1.2528 Zinc finger protein
evm.TU.Chr12.66 Copper transport protein
evm.TU.Chr12.68 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail