PPGR - Gene Detail

Basic Information

Gene ID	evm.TU.Chr7.341 View in Genome Browser
Position	Chr7:5273613-5274320 (-) 707bp
Gene Type	gene
Gene Description (Protein Product)	lycopene beta cyclase
Organism	Diospyros oleifera Cheng
Also AS	AT3G10230

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

evm.model.BG.256.p Protein LUTEIN DEFICIENT 5

evm.model.BG.472.p UbiA prenyltransferase family

evm.model.BG.207.p 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006629	lipid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009509	chromoplast	CC
GO:0009536	plastid	CC
GO:0009975	cyclase activity	MF
GO:0009987	cellular process	BP
GO:0016108	tetraterpenoid metabolic process	BP
GO:0016109	tetraterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016116	carotenoid metabolic process	BP
GO:0016117	carotenoid biosynthetic process	BP
GO:0016853	isomerase activity	MF
GO:0016860	intramolecular oxidoreductase activity	MF
GO:0042440	pigment metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045436	lycopene beta cyclase activity	MF
GO:0046148	pigment biosynthetic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00906	Carotenoid biosynthesis	-