Basic Information
Gene ID
evm.model.BG.339.p
Position
Chr13:5609863-5612077 (+)
2214bp
Gene Type
gene
Gene Description (Protein Product)
U4 U6.U5 tri-snRNP-associated protein
Organism
Also AS AT5G16780


Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.model.BG.444.p BUD13 homolog
evm.model.BG.359.p ribosomal protein L7Ae L30e S12e Gadd45 family protein
evm.model.BG.439.p Peptidyl-prolyl cis-trans isomerase
Regulatory gene
evm.TU.Chr1.1678 NAC domain-containing protein
evm.TU.Chr1.2354 transcription factor
evm.TU.Chr1.3067 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.