Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
EUGRSUZ_A00040
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Position
KK198753:363031-371149 (-)
8118bp
Gene Type
gene
Gene Description (Protein Product)
"transcription
Organism
Eucalyptus grandis
Also AS Eucgr.A00040AT2G43500

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EUGRSUZ_G02343 transcription factor
EUGRSUZ_H03421 Tetratricopeptide repeat (TPR)-like superfamily protein
EUGRSUZ_E01168 Rop guanine nucleotide exchange factor
Regulatory gene
EUGRSUZ_D01054 Protein BASIC PENTACYSTEINE6-like
EUGRSUZ_E01260 Protein BASIC PENTACYSTEINE7-like
EUGRSUZ_G02067 Protein BASIC PENTACYSTEINE2-like
Target gene
EUGRSUZ_A00076 Protein farnesyltransferase geranylgeranyltransferase type-1 subunit
EUGRSUZ_A00107 Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region
EUGRSUZ_A00176 Pathogenesis-related protein Bet v I family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)