PPGR - Gene Detail

Basic Information

Gene ID	evm.TU.Chr17.1973 View in Genome Browser
Position	GWHBISF00000486:41667859-41674394 (-) 6535bp
Gene Type	gene
Gene Description (Protein Product)	Component of the eukaryotic translation initiation factor 3 (eIF-3) complex; which is involved in protein synthesis and; together with other initiation factors; stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
Organism	Eucommia ulmoides
Also AS	AT5G27640

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

evm.TU.Chr5.17 mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex; which is involved in protein synthesis of a specialized repertoire of mRNAs and; together with other initiation factors; stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex; eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

evm.TU.Chr5.17

evm.TU.Chr17.878 RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex; which is involved in protein synthesis of a specialized repertoire of mRNAs and; together with other initiation factors; stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Regulatory gene

evm.TU.Chr1.1507 Developmental protein SEPALLATA 1-like isoform X1

evm.TU.Chr1.508 MADS-box protein

evm.TU.Chr1.532 Acetolactate synthase, small subunit

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

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