Basic Information
Gene ID
evm.TU.Chr2.72
Position
GWHBISF00000493:709332-712347 (+)
3015bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitin-related modifier
Organism
Also AS AT4G26840

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.Chr8.437 Belongs to the ubiquitin-conjugating enzyme family
evm.TU.Chr4.2238 This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
evm.TU.Chr4.2238 ribosomal protein
Regulatory gene
evm.TU.Chr1.1507 Developmental protein SEPALLATA 1-like isoform X1
evm.TU.Chr1.508 MADS-box protein
evm.TU.Chr10.1970_evm.TU.Chr10.1971 Floral homeotic protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.