PPGR - Gene Detail

Basic Information

Gene ID	evm.TU.Chr6.346 View in Genome Browser
Position	GWHBISF00000498:4433947-4435957 (-) 2010bp
Gene Type	gene
Gene Description (Protein Product)	CCT motif
Organism	Eucommia ulmoides
Also AS	AT5G24930

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

evm.TU.Chr9.818 Adagio protein

evm.TU.F000003F_2.6 Nuclear transcription factor Y subunit

evm.TU.Chr8.3088 Nuclear pore complex assembly

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0008150	biological_process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009639	response to red or far red light	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009909	regulation of flower development	BP
GO:0009987	cellular process	BP
GO:0010017	red or far-red light signaling pathway	BP
GO:0010099	regulation of photomorphogenesis	BP
GO:0010114	response to red light	BP
GO:0010161	red light signaling pathway	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0023052	signaling	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048580	regulation of post-embryonic development	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048831	regulation of shoot system development	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071214	cellular response to abiotic stimulus	BP
GO:0071478	cellular response to radiation	BP
GO:0071482	cellular response to light stimulus	BP
GO:0071489	cellular response to red or far red light	BP
GO:0071491	cellular response to red light	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0104004	cellular response to environmental stimulus	BP
GO:0140110	transcription regulator activity	MF
GO:1901363	heterocyclic compound binding	MF
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000026	regulation of multicellular organismal development	BP
GO:2000030	regulation of response to red or far red light	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2000241	regulation of reproductive process	BP
GO:2001141	regulation of RNA biosynthetic process	BP