Basic Information
Gene ID
evm.TU.Chr7.578
Position
GWHBISF00000492:10263342-10270774 (+)
7432bp
Gene Type
gene
Gene Description (Protein Product)
Interconversion of serine and glycine
Organism
Also AS AT1G36370

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.F000130F.26 Long chain base biosynthesis protein 1-like
evm.TU.Chr9.2019 histone-lysine N-methyltransferase; H3 lysine-9 specific
evm.TU.Chr9.2019 Callose synthase
Regulatory gene
evm.TU.Chr17.119 GAGA binding protein-like family
evm.TU.Chr8.1281 GAGA binding protein-like family
evm.TU.Chr8.162 ABC transporter C family member

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00670 One carbon pool by folate -
map00630 Glyoxylate and dicarboxylate metabolism -
map00460 Cyanoamino acid metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].