Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
evm.TU.Chr9.1016
View in Genome Browser
Position
GWHBISF00000491:16497014-16502325 (-)
5311bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes medium subunit family
Organism
Eucommia ulmoides
Also AS AT1G60780

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.F000130F.30 adaptor complexes medium subunit family
evm.TU.Chr9.931 Belongs to the adaptor complexes small subunit family
evm.TU.F000074F_3.40 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles; which further mediate biosynthetic protein transport from the ER; via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes; and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
Regulatory gene
evm.TU.Chr1.1505 Belongs to the MIP aquaporin (TC 1.A.8) family
evm.TU.Chr1.1716 Eukaryotic translation initiation factor
evm.TU.Chr1.1794 Myb-related protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0000323 lytic vacuole CC
GO:0001775 cell activation BP
GO:0002252 immune effector process BP
GO:0002263 cell activation involved in immune response BP
GO:0002274 myeloid leukocyte activation BP
GO:0002275 myeloid cell activation involved in immune response BP
GO:0002283 neutrophil activation involved in immune response BP
GO:0002366 leukocyte activation involved in immune response BP
GO:0002376 immune system process BP
GO:0002443 leukocyte mediated immunity BP
GO:0002444 myeloid leukocyte mediated immunity BP
GO:0002446 neutrophil mediated immunity BP
GO:0002478 antigen processing and presentation of exogenous peptide antigen BP
GO:0002495 antigen processing and presentation of peptide antigen via MHC class II BP
GO:0002504 antigen processing and presentation of peptide or polysaccharide antigen via MHC class II BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005765 lysosomal membrane CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0019882 antigen processing and presentation BP
GO:0019884 antigen processing and presentation of exogenous antigen BP
GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II BP
GO:0021700 developmental maturation BP
GO:0030135 coated vesicle CC
GO:0030136 clathrin-coated vesicle CC
GO:0030141 secretory granule CC
GO:0030154 cell differentiation BP
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030662 coated vesicle membrane CC
GO:0030665 clathrin-coated vesicle membrane CC
GO:0030667 secretory granule membrane CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032438 melanosome organization BP
GO:0032502 developmental process BP
GO:0032588 trans-Golgi network membrane CC
GO:0032940 secretion by cell BP
GO:0033059 cellular pigmentation BP
GO:0035579 specific granule membrane CC
GO:0035646 endosome to melanosome transport BP
GO:0036230 granulocyte activation BP
GO:0042119 neutrophil activation BP
GO:0042581 specific granule CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043299 leukocyte degranulation BP
GO:0043312 neutrophil degranulation BP
GO:0043473 pigmentation BP
GO:0043476 pigment accumulation BP
GO:0043482 cellular pigment accumulation BP
GO:0043485 endosome to pigment granule transport BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045055 regulated exocytosis BP
GO:0045321 leukocyte activation BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048002 antigen processing and presentation of peptide antigen BP
GO:0048066 developmental pigmentation BP
GO:0048753 pigment granule organization BP
GO:0048757 pigment granule maturation BP
GO:0048869 cellular developmental process BP
GO:0050690 mitigation of host antiviral defense response BP
GO:0050896 response to stimulus BP
GO:0050931 pigment cell differentiation BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098805 membrane CC
GO:0098852 lytic vacuole membrane CC
GO:0099503 secretory vesicle CC