Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
evm.TU.Chr9.1939
View in Genome Browser
Position
GWHBISF00000491:42909827-42978788 (-)
68961bp
Gene Type
gene
Gene Description (Protein Product)
Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks
Organism
Eucommia ulmoides
Also AS AT5G04130

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
evm.TU.Chr9.382 Single-stranded DNA-binding protein WHY1
evm.TU.Chr9.709 ATP-dependent DNA helicase
evm.TU.Chr9.800 Nuclear pore complex protein
Regulatory gene
evm.TU.Chr1.532 Acetolactate synthase, small subunit
evm.TU.Chr11.1396 AP2-like ethylene-responsive transcription factor
evm.TU.Chr11.443 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003916 DNA topoisomerase activity MF
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity MF
GO:0005575 cellular_component CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006265 DNA topological change BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007059 chromosome segregation BP
GO:0008094 ATP-dependent activity, acting on DNA MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009295 nucleoid CC
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016853 isomerase activity MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042623 ATP hydrolysis activity MF
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0051276 chromosome organization BP
GO:0061505 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity MF
GO:0071103 DNA conformation change BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0140097 catalytic activity, acting on DNA MF
GO:1901360 organic cyclic compound metabolic process BP