PPGR - Gene Detail

Basic Information

Gene ID	FSB0131461 View in Genome Browser
Position	scaffold3201_size46494:37929-41971 (-) 4042bp
Gene Type	gene
Gene Description (Protein Product)	IAA-amino acid hydrolase ILR1-like
Organism	Fagus sylvatica
Also AS	AT1G51760

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

FSB0155452 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

FSB0157773 Ribosomal L40e family

FSB0141851 ubiquitin-60S ribosomal protein

Regulatory gene

FSB0100544 transcription factor

FSB0100978 AP2-like ethylene-responsive transcription factor

FSB0101557 B3 domain-containing transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0002682	regulation of immune system process	BP
GO:0002831	regulation of response to biotic stimulus	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005886	plasma membrane	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009611	response to wounding	BP
GO:0009850	auxin metabolic process	BP
GO:0009987	cellular process	BP
GO:0010112	regulation of systemic acquired resistance	BP
GO:0010178	IAA-amino acid conjugate hydrolase activity	MF
GO:0010179	IAA-Ala conjugate hydrolase activity	MF
GO:0010817	regulation of hormone levels	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016787	hydrolase activity	MF
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	MF
GO:0031347	regulation of defense response	BP
GO:0032101	regulation of response to external stimulus	BP
GO:0042445	hormone metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043900	obsolete regulation of multi-organism process	BP
GO:0044237	cellular metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045088	regulation of innate immune response	BP
GO:0048583	regulation of response to stimulus	BP
GO:0050776	regulation of immune response	BP
GO:0050789	regulation of biological process	BP
GO:0050896	response to stimulus	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071944	cell periphery	CC
GO:0080134	regulation of response to stress	BP