Basic Information
Gene ID
Position
scaffold6222_size13229:11036-11940 (+)
904bp
Gene Type
gene
Gene Description (Protein Product)
Phytoene synthase
Organism
Also AS AT5G17230

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FSB0160153 Phytoene synthase
FSB0161176 Phytoene dehydrogenase, chloroplastic
FSB0153519 Belongs to the FPP GGPP synthase family
Regulatory gene
FSB0102972 Dof zinc finger protein
FSB0104135 dof zinc finger protein
FSB0104454 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -