Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FSB0160207
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Position
scaffold921_size150349:100286-110131 (-)
9845bp
Gene Type
gene
Gene Description (Protein Product)
histone deacetylase
Organism
Fagus sylvatica
Also AS AT4G33470

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FSB0161927 Hemimethylated DNA-binding protein YccV like
FSB0160697 plastid-lipid-associated protein 14, chloroplastic
FSB0160781 2-succinylbenzoate--CoA ligase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006476 protein deacetylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0015631 tubulin binding MF
GO:0016787 hydrolase activity MF
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds MF
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides MF
GO:0019213 deacetylase activity MF
GO:0019538 protein metabolic process BP
GO:0019899 enzyme binding MF
GO:0019902 phosphatase binding MF
GO:0019903 protein phosphatase binding MF
GO:0033558 protein lysine deacetylase activity MF
GO:0035601 protein deacylation BP
GO:0036211 protein modification process BP
GO:0042903 tubulin deacetylase activity MF
GO:0043014 alpha-tubulin binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043621 protein self-association MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048487 beta-tubulin binding MF
GO:0051721 protein phosphatase 2A binding MF
GO:0071704 organic substance metabolic process BP
GO:0090042 tubulin deacetylation BP
GO:0098732 macromolecule deacylation BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP