Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FSB0160426
View in Genome Browser
Position
scaffold931_size149231:25277-25671 (-)
394bp
Gene Type
gene
Gene Description (Protein Product)
ribosomal protein
Organism
Fagus sylvatica
Also AS AT5G03850

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FSB0160868 Belongs to the universal ribosomal protein uS17 family
FSB0160558 Belongs to the eukaryotic ribosomal protein eS8 family
FSB0161607 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000028 ribosomal small subunit assembly BP
GO:0002181 cytoplasmic translation BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0005791 rough endoplasmic reticulum CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005844 polysome CC
GO:0005886 plasma membrane CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006364 rRNA processing BP
GO:0006396 RNA processing BP
GO:0006412 translation BP
GO:0006518 peptide metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0007444 imaginal disc development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0012505 endomembrane system CC
GO:0015935 small ribosomal subunit CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016070 RNA metabolic process BP
GO:0016072 rRNA metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0022618 ribonucleoprotein complex assembly BP
GO:0022626 cytosolic ribosome CC
GO:0022627 cytosolic small ribosomal subunit CC
GO:0030312 external encapsulating structure CC
GO:0030490 maturation of SSU-rRNA BP
GO:0030867 rough endoplasmic reticulum membrane CC
GO:0031090 organelle membrane CC
GO:0031984 organelle subcompartment CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0034470 ncRNA processing BP
GO:0034622 protein-containing complex assembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035220 wing disc development BP
GO:0035295 tube development BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042254 ribosome biogenesis BP
GO:0042255 ribosome assembly BP
GO:0042274 ribosomal small subunit biogenesis BP
GO:0042788 polysomal ribosome CC
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048513 animal organ development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0060429 epithelium development BP
GO:0065003 protein-containing complex assembly BP
GO:0070925 organelle assembly BP
GO:0071704 organic substance metabolic process BP
GO:0071826 ribonucleoprotein complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098552 side of membrane CC
GO:0098554 cytoplasmic side of endoplasmic reticulum membrane CC
GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane CC
GO:0098562 cytoplasmic side of membrane CC
GO:0098588 bounding membrane of organelle CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1990904 ribonucleoprotein complex CC
KEGG Term Name Description
map03010 Ribosome -