Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000005000
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Position
Contig1024:114969-117008 (-)
2039bp
Gene Type
gene
Gene Description (Protein Product)
Myb-related protein
Organism
Fraxinus excelsior
Also AS AT3G47600

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000088420 EF-hand domain
FRAEX38873_v2_000281140 Glutaredoxin
FRAEX38873_v2_000017630 FLX-like 2
Regulatory gene
FRAEX38873_v2_000000110 GAGA binding protein-like family
FRAEX38873_v2_000062010 Protein BASIC PENTACYSTEINE6-like
FRAEX38873_v2_000097090 GAGA binding protein-like family
Target gene
FRAEX38873_v2_000000010 SPRY domain
FRAEX38873_v2_000000090 Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum
FRAEX38873_v2_000000100 PA domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific MF
GO:0000988 obsolete transcription factor activity, protein binding MF
GO:0000989 obsolete transcription factor activity, transcription factor binding MF
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001076 obsolete transcription factor activity, RNA polymerase II transcription factor binding MF
GO:0001101 response to acid chemical BP
GO:0001134 obsolete transcription regulator recruiting activity MF
GO:0001135 obsolete RNA polymerase II transcription regulator recruiting activity MF
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009737 response to abscisic acid BP
GO:0009751 response to salicylic acid BP
GO:0009753 response to jasmonic acid BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010025 wax biosynthetic process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010115 regulation of abscisic acid biosynthetic process BP
GO:0010166 wax metabolic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010628 positive regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0014070 response to organic cyclic compound BP
GO:0019216 regulation of lipid metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0023051 regulation of signaling BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0032502 developmental process BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043455 regulation of secondary metabolic process BP
GO:0043565 sequence-specific DNA binding MF
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045893 positive regulation of DNA-templated transcription BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0046677 response to antibiotic BP
GO:0046686 response to cadmium ion BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051254 positive regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0080050 regulation of seed development BP
GO:0080090 regulation of primary metabolic process BP
GO:0080167 response to karrikin BP
GO:0097159 organic cyclic compound binding MF
GO:0097305 response to alcohol BP
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1901419 regulation of response to alcohol BP
GO:1901568 fatty acid derivative metabolic process BP
GO:1901570 fatty acid derivative biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902680 positive regulation of RNA biosynthetic process BP
GO:1902930 regulation of alcohol biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903508 positive regulation of nucleic acid-templated transcription BP
GO:1904276 regulation of wax biosynthetic process BP
GO:1904278 positive regulation of wax biosynthetic process BP
GO:1905957 regulation of cellular response to alcohol BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000033 regulation of seed dormancy process BP
GO:2000034 regulation of seed maturation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP