Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
FRAEX38873_v2_000017990
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Position
Contig114:164156-169787 (+)
5631bp
Gene Type
gene
Gene Description (Protein Product)
LOB domain-containing protein
Organism
Fraxinus excelsior
Also AS AT1G65620

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
FRAEX38873_v2_000396770 polycomb group protein
FRAEX38873_v2_000396770 fertilization-independent endosperm
FRAEX38873_v2_000368830 Histone-lysine N-methyltransferase
Regulatory gene
FRAEX38873_v2_000001190 Stress-associated protein
FRAEX38873_v2_000002120 B3 DNA binding domain
FRAEX38873_v2_000005550 Stress-associated protein
Target gene
FRAEX38873_v2_000000570 BEST Arabidopsis thaliana protein match is
FRAEX38873_v2_000000820 EF hand
FRAEX38873_v2_000001710 purine permease

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003002 regionalization BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0009791 post-embryonic development BP
GO:0009798 axis specification BP
GO:0009799 specification of symmetry BP
GO:0009908 flower development BP
GO:0009943 adaxial/abaxial axis specification BP
GO:0009944 polarity specification of adaxial/abaxial axis BP
GO:0009954 proximal/distal pattern formation BP
GO:0009955 adaxial/abaxial pattern specification BP
GO:0022414 reproductive process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048441 petal development BP
GO:0048465 corolla development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0065001 specification of axis polarity BP
GO:0070013 intracellular organelle lumen CC
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP